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STRINGSTRING
Mettu_0020 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_0020" - PFAM: TonB-dependent receptor, beta-barrel in Methylobacter tundripaludum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_0020PFAM- TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG- mca-MCA2321 TonB-dependent receptor, putative (683 aa)    
Predicted Functional Partners:
Mettu_2378
Protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins (266 aa)
 
  0.702
Mettu_1083
KEGG- pmy-Pmen_0549 sporulation domain-containing protein; PFAM- Sporulation/cell division region, bacteria; SMART- ATPase, AAA+ type, core (628 aa)
    
 
  0.696
Mettu_2248
Protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins (271 aa)
 
  0.690
Mettu_0428
KEGG- ajs-Ajs_1523 TonB-dependent siderophore receptor; TIGRFAM- TonB-dependent siderophore receptor; PFAM- TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug (736 aa)
 
 
  0.682
Mettu_0019
Ferric uptake regulator, Fur family; PFAM- Ferric-uptake regulator; KEGG- mca-MCA2322 transctiptional regulator, putative; Belongs to the Fur family (169 aa)
         
  0.666
Mettu_1703
PFAM- TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; KEGG- ccs-CCNA_01194 TonB-dependent receptor (799 aa)
 
   
  0.660
Mettu_2308
TonB family protein; KEGG- mca-MCA0441 TonB domain-containing protein; TIGRFAM- TonB, C-terminal; PFAM- Gram-negative bacterial tonB protein (259 aa)
   
  0.650
Mettu_1600
TonB family protein; TIGRFAM- TonB, C-terminal; KEGG- mca-MCA2337 TonB-dependent receptor, putative (292 aa)
   
  0.650
Mettu_0431
KEGG- meh-M301_2530 TonB family protein; TIGRFAM- TonB, C-terminal; PFAM- Gram-negative bacterial tonB protein (253 aa)
   
  0.650
Mettu_4159
PFAM- TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG- mpt-Mpe_A3267 putative outer membrane receptor for iron transport (733 aa)
    
   
  0.589
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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