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trmJ protein (Methylobacter tundripaludum) - STRING interaction network
"trmJ" - tRNA Cm32/Um32 methyltransferase in Methylobacter tundripaludum
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
trmJtRNA Cm32/Um32 methyltransferase ; Catalyzes the formation of 2’O-methylated cytidine (Cm32) or 2’O-methylated uridine (Um32) at position 32 in tRNA (246 aa)    
Predicted Functional Partners:
Mettu_0028
Serine acetyltransferase (255 aa)
   
        0.926
Mettu_0030
Inositol monophosphatase (284 aa)
 
        0.787
Mettu_0027
Transcriptional regulator, BadM/Rrf2 family (157 aa)
   
        0.746
Mettu_0026
Cysteine desulfurase (368 aa)
   
        0.725
Mettu_1946
Excinuclease ABC C subunit domain protein (178 aa)
 
            0.711
Mettu_0025
Iron-sulfur cluster assembly accessory protein (107 aa)
   
   
  0.706
ksgA
S-adenosylmethionine-6-N’, N’-adenosyl(rRNA) dimethyltransferase ; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3’-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits (282 aa)
 
   
  0.612
topA
DNA topoisomerase I ; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5’-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3’-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] (772 aa)
 
          0.596
ndk
Nucleoside-2-P kinase ; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate (143 aa)
 
          0.560
cysS
Cysteinyl-tRNA synthetase (492 aa)
            0.557
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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