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STRINGSTRING
Mettu_0049 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_0049" - PFAM: Small multidrug resistance protein in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_0049PFAM- Small multidrug resistance protein; KEGG- mmw-Mmwyl1_1141 small multidrug resistance protein (127 aa)    
Predicted Functional Partners:
Mettu_0048
TIGRFAM- Sulphur relay, TusB/DsrH; KEGG- alv-Alvin_1255 DsrH protein (96 aa)
              0.848
Mettu_0047
Sulfurtransferase; Part of a sulfur-relay system (108 aa)
              0.848
Mettu_2949
PFAM- Phosphate transporter; KEGG- phosphate transporter (370 aa)
   
     
  0.550
Mettu_0050
Flagellar brake protein YcgR; Acts as a flagellar brake, regulating swimming and swarming in a bis-(3’-5’) cyclic diguanylic acid (c-di-GMP)- dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility (239 aa)
              0.515
Mettu_1576
Outer membrane adhesin like proteiin; TIGRFAM- VCBS repeat domain; PFAM- Putative Ig; KEGG- cch-Cag_1242 VCBS; SMART- Dystroglycan-type cadherin-like (6210 aa)
         
  0.467
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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