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xseA protein (Methylobacter tundripaludum) - STRING interaction network
"xseA" - Exodeoxyribonuclease VII large subunit in Methylobacter tundripaludum
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
xseAExodeoxyribonuclease VII large subunit ; Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides (452 aa)    
Predicted Functional Partners:
xseB
Exodeoxyribonuclease VII small subunit ; Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides (77 aa)
 
  0.997
Mettu_1212
Superoxide dismutase ; Destroys radicals which are normally produced within the cells and which are toxic to biological systems (193 aa)
       
  0.875
Mettu_0750
Geranyltranstransferase (298 aa)
 
   
  0.841
Mettu_1042
Single-stranded-DNA-specific exonuclease RecJ (581 aa)
   
   
  0.801
Mettu_0162
Recombination protein N ; May be involved in recombinational repair of damaged DNA (568 aa)
   
   
  0.785
Mettu_0901
Riboflavin biosynthesis protein RibD ; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5’-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5’-phosphate (361 aa)
   
        0.740
guaA
Glutamine amidotransferase ; Catalyzes the synthesis of GMP from XMP (528 aa)
   
   
  0.718
uvrB
Excinuclease ABC subunit B ; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...] (670 aa)
 
     
  0.712
recO
Recombination protein O ; Involved in DNA repair and RecF pathway recombination (249 aa)
   
 
  0.695
Mettu_0051
Cyclic di-GMP binding protein YcgR ; Acts as a flagellar brake, regulating swimming and swarming in a bis-(3’-5’) cyclic diguanylic acid (c-di-GMP)- dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility (245 aa)
              0.695
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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