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Mettu_0056 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_0056" - KEGG: mca:MCA1290 hypothetical protein in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_0056KEGG- mca-MCA1290 hypothetical protein (145 aa)    
Predicted Functional Partners:
Mettu_0645
PFAM- O-antigen ligase-related; KEGG- meh-M301_2021 O-antigen polymerase (404 aa)
   
          0.596
Mettu_1264
KEGG- gca-Galf_1040 hypothetical protein (404 aa)
   
          0.579
Mettu_3335
KEGG- mca-MCA2833 hypothetical protein (320 aa)
   
          0.563
Mettu_0057
TIGRFAM- Diguanylate cyclase, predicted; PFAM- Diguanylate cyclase, predicted; KEGG- mpt-Mpe_A1019 diguanylate cyclase; SMART- Diguanylate cyclase, predicted (351 aa)
              0.555
Mettu_3589
KEGG- mca-MCA1811 hypothetical protein (426 aa)
   
          0.537
Mettu_1028
PFAM- TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG- mca-MCA2180 TonB-dependent receptor, putative (688 aa)
   
          0.520
Mettu_2031
KEGG- cytochrome c family protein (134 aa)
   
          0.504
Mettu_1961
KEGG- pst-PSPTO_0030 hypothetical protein (614 aa)
   
          0.458
Mettu_2032
PFAM- Metallophosphoesterase; KEGG- metallophosphoesterase (358 aa)
   
          0.441
Mettu_2111
SMART- ATPase, AAA+ type, core; KEGG- bac-BamMC406_0007 AAA ATPase (387 aa)
   
          0.437
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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