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Mettu_0080 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_0080" - DNA polymerase beta domain protein region in Methylobacter tundripaludum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_0080DNA polymerase beta domain protein region; PFAM- Nucleotidyltransferase; KEGG- psa-PST_1417 nucleotidyltransferase family protein (96 aa)    
Predicted Functional Partners:
Mettu_0079
PFAM- FRG domain; KEGG- rru-Rru_A0303 hypothetical protein (442 aa)
              0.816
Mettu_3321
DNA polymerase beta domain protein region; PFAM- Nucleotidyltransferase; KEGG- ttj-TTHA1649 nucleotidyltransferase (116 aa)
   
          0.745
Mettu_3411
PFAM- Protein of unknown function DUF433; KEGG- ava-Ava_1741 hypothetical protein (77 aa)
   
          0.576
Mettu_0082
KEGG- paa-Paes_2094 addiction module toxin, RelE/StbE family; TIGRFAM- Addiction module toxin, RelE/StbE; PFAM- Plasmid stabilisation system (89 aa)
 
          0.569
Mettu_2556
PFAM- Plasmid stabilisation system; KEGG- mvu-Metvu_0590 addiction module toxin, RelE/StbE family (87 aa)
   
          0.511
Mettu_2051
PFAM- Protein of unknown function DUF497; KEGG- tkm-TK90_1701 protein of unknown function DUF497 (89 aa)
 
          0.488
Mettu_0081
annotation not available (72 aa)
              0.474
Mettu_2913
PFAM- Protein of unknown function DUF497; KEGG- glo-Glov_2221 protein of unknown function DUF497 (97 aa)
 
          0.471
Mettu_3412
KEGG- slt-Slit_2475 hypothetical protein (110 aa)
   
          0.445
Mettu_0443
Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family (803 aa)
       
    0.428
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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