STRINGSTRING
asd protein (Methylobacter tundripaludum) - STRING interaction network
"asd" - Aspartate-beta-semialdehyde dehydrogenase in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
asdAspartate-beta-semialdehyde dehydrogenase ; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate (340 aa)    
Predicted Functional Partners:
Mettu_4081
Aspartokinase (408 aa)
 
 
  0.999
Mettu_1040
Homoserine dehydrogenase (436 aa)
   
  0.999
Mettu_3168
4-hydroxy-tetrahydrodipicolinate synthase ; Catalyzes the condensation of (S)-aspartate-beta- semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) (291 aa)
 
 
  0.998
Mettu_2094
4-hydroxy-tetrahydrodipicolinate synthase ; Catalyzes the condensation of (S)-aspartate-beta- semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) (321 aa)
 
 
  0.993
Mettu_3480
Pyruvate-flavodoxin oxidoreductase ; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin (1212 aa)
         
  0.954
Mettu_1041
Threonine synthase ; Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine (359 aa)
   
 
  0.949
lysA
Diaminopimelate decarboxylase ; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine (415 aa)
 
 
  0.931
argD
Acetylornithine aminotransferase (395 aa)
 
 
  0.894
Mettu_0707
Acetylornithine transaminase (461 aa)
   
 
  0.877
Mettu_0092
Putative uncharacterized protein (61 aa)
              0.859
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
Server load: low (8%) [HD]