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fliA protein (Methylobacter tundripaludum) - STRING interaction network
"fliA" - RNA polymerase sigma factor FliA in Methylobacter tundripaludum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Score
fliARNA polymerase sigma factor FliA; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes (237 aa)    
Predicted Functional Partners:
Mettu_1248
KEGG- hch-HCH_04721 negative regulator of flagellin synthesis (anti-sigma28 factor); TIGRFAM- flagellar biosynthesis anti-sigma factor protein FlgM; PFAM- Anti-sigma-28 factor, FlgM (102 aa)
 
  0.992
Mettu_1245
KEGG- vfm-VFMJ11_2008 flagellar basal body rod protein FlgC; TIGRFAM- Flagellar basal-body rod protein FlgC; PFAM- Protein of unknown function DUF1078, C-terminal; Flagellar basal body rod protein, N-terminal; Belongs to the flagella basal body rod proteins family (138 aa)
 
 
  0.990
Mettu_0097
Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation (331 aa)
 
   
  0.989
Mettu_0098
Flagellar motor switch protein FliN; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation (126 aa)
 
   
  0.984
Mettu_1246
Flagellar basal body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body (130 aa)
 
 
  0.984
Mettu_1274
Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella (284 aa)
   
  0.981
Mettu_1272
Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end (462 aa)
 
   
  0.977
Mettu_1243
KEGG- cps-CPS_1480 flagellar hook protein FlgE; TIGRFAM- Fagellar hook-basal body protein, FlgE/F/G; PFAM- Protein of unknown function DUF1078, C-terminal; Flagellar basal body FlaE; Flagellar basal body rod protein, N-terminal (597 aa)
 
   
  0.974
Mettu_1244
Basal-body rod modification protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein (231 aa)
 
   
  0.973
Mettu_1271
KEGG- hha-Hhal_0503 flagellar protein FliS; TIGRFAM- Flagellar protein FliS; PFAM- Flagellar protein FliS (129 aa)
 
   
  0.971
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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