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STRINGSTRING
Mettu_0108 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_0108" - PFAM: MotA/TolQ/ExbB proton channel in Methylobacter tundripaludum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
Mettu_0108PFAM- MotA/TolQ/ExbB proton channel; KEGG- ppg-PputGB1_3905 flagellar motor protein (251 aa)    
Predicted Functional Partners:
Mettu_0109
KEGG- nhl-Nhal_3607 OmpA/MotB domain protein; manually curated; PFAM- Outer membrane protein, OmpA/MotB, C-terminal (283 aa)
 
  0.999
Mettu_2967
PFAM- Outer membrane protein, OmpA/MotB, C-terminal; KEGG- tbd-Tbd_1244 flagellar motor protein MotB (302 aa)
   
 
  0.972
fliA
RNA polymerase sigma factor FliA; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes (237 aa)
   
  0.959
flhB
Flagellar biosynthetic protein FlhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin (374 aa)
 
   
  0.956
Mettu_0098
Flagellar motor switch protein FliN; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation (126 aa)
 
   
  0.943
flhA
Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin (699 aa)
 
   
  0.937
Mettu_0102
Flagellar biosynthetic protein FliR; Role in flagellar biosynthesis (257 aa)
 
 
  0.932
fliP
Flagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system (252 aa)
 
   
  0.931
Mettu_0097
Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation (331 aa)
 
   
  0.922
Mettu_0106
Site-determining protein; PFAM- Cobyrinic acid a,c-diamide synthase; KEGG- ppg-PputGB1_3911 cobyrinic acid ac-diamide synthase; Belongs to the ParA family (277 aa)
 
     
  0.904
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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