STRINGSTRING
Mettu_0110 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_0110" - Putative uncharacterized protein in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_0110Putative uncharacterized protein (52 aa)    
Predicted Functional Partners:
Mettu_0111
Putative uncharacterized protein (139 aa)
              0.859
Mettu_0109
OmpA/MotB domain protein (283 aa)
              0.487
Mettu_0108
MotA/TolQ/ExbB proton channel (251 aa)
              0.487
fliA
Sigma-28 ; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes (237 aa)
              0.459
Mettu_0106
Site-determining protein (277 aa)
              0.448
Mettu_0105
Flagellar biosynthetic protein FlhF (475 aa)
              0.400
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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