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STRINGSTRING
Mettu_0112 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_0112" - PFAM: Uncharacterised protein family UPF0005 in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_0112PFAM- Uncharacterised protein family UPF0005; KEGG- azo-azo0911 carrier/transport protein; Belongs to the BI1 family (222 aa)    
Predicted Functional Partners:
nnrD
Multifunctional fusion protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration; Belongs to the NnrD/CARKD family (487 aa)
   
        0.603
Mettu_0113
PFAM- Globin, truncated bacterial-like; KEGG- mca-MCA1878 hypothetical protein (131 aa)
              0.577
Mettu_3060
Protease HtpX; KEGG- mca-MCA1383 heat shock protein HtpX; HAMAP- protease htpX; PFAM- Peptidase M48, Ste24p; Peptidase M48B, HtpX peptidase N-terminal; Belongs to the peptidase M48B family (292 aa)
   
   
  0.489
Mettu_2833
HAMAP- protease htpX; KEGG- mca-MCA1383 heat shock protein HtpX; Belongs to the peptidase M48B family (291 aa)
   
   
  0.489
Mettu_0114
KEGG- mca-MCA0402 hypothetical protein; manually curated; PFAM- Protein of unknown function DUF45 (241 aa)
              0.466
Mettu_0301
KEGG- nhl-Nhal_3061 DNA/RNA non-specific endonuclease; PFAM- DNA/RNA non-specific endonuclease; SMART- Extracellular Endonuclease, subunit A (297 aa)
   
   
  0.436
Mettu_1460
Pyridoxine 4-dehydrogenase; KEGG- azl-AZL_013980 aldo-keto reductase yakc; PFAM- Aldo/keto reductase (329 aa)
   
 
    0.429
Mettu_2438
HemX domain protein; PFAM- HemX; KEGG- mca-MCA3061 bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III C-methyltransferase (439 aa)
   
          0.428
rnr
Ribonuclease R; 3’-5’ exoribonuclease that releases 5’-nucleoside monophosphates and is involved in maturation of structured RNAs (746 aa)
       
    0.427
Mettu_0142
PFAM- Cytochrome c oxidase assembly protein CtaG/Cox11; KEGG- mca-MCA0882 cytochrome c oxidase assembly protein (180 aa)
 
        0.414
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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