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Mettu_0121 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_0121" - SMART: ATPase, AAA+ type, core in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_0121SMART- ATPase, AAA+ type, core; TIGRFAM- ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system; KEGG- mca-MCA1280 ABC transporter, ATP-binding protein; PFAM- ABC transporter-like (246 aa)    
Predicted Functional Partners:
Mettu_0122
KEGG- mca-MCA1281 ABC transporter, permease protein; TIGRFAM- alcohol ABC transporter, permease protein; PFAM- ABC-2 type transporter (267 aa)
 
  0.984
Mettu_0119
TIGRFAM- ABC transporter, substrate binding protein, PQQ-dependent alcohol dehydrogenase system; KEGG- mca-MCA1278 hypothetical protein (397 aa)
 
   
    0.982
Mettu_0120
TIGRFAM- PQQ-dependent catabolism-associated beta-propeller protein; YVTN beta-propeller repeat; KEGG- mca-MCA1279 hypothetical protein (320 aa)
 
     
  0.975
Mettu_3054
ABC-type transporter, periplasmic subunit family 3; KEGG- azl-AZL_a05750 ABC transporter substrate-binding protein; PFAM- Extracellular solute-binding protein, family 3; SMART- Extracellular solute-binding protein, family 3 (317 aa)
 
   
    0.795
Mettu_1232
KEGG- azl-AZL_a05750 ABC transporter substrate-binding protein (319 aa)
 
   
    0.795
Mettu_1233
ABC-type transporter, integral membrane subunit; PFAM- Binding-protein-dependent transport systems inner membrane component; KEGG- psa-PST_2932 sulfonate ABC transporter, permease protein, putative (248 aa)
   
    0.773
Mettu_0419
TIGRFAM- PQQ-dependent dehydrogenase, methanol/ethanol family; KEGG- mca-MCA0299 methanol dehydrogenase protein, large subunit, putative; PFAM- PQQ-dependent enzyme, N-terminal; Pyrrolo-quinoline quinone repeat; PQQ-dependent enzyme, C-terminal (618 aa)
 
          0.746
Mettu_3041
TIGRFAM- PQQ-dependent dehydrogenase, methanol/ethanol family; KEGG- mca-MCA0779 methanol dehydrogenase protein, large subunit; PFAM- PQQ-dependent enzyme, N-terminal; Pyrrolo-quinoline quinone repeat; PQQ-dependent enzyme, C-terminal (604 aa)
 
          0.713
Mettu_4256
KEGG- bbt-BBta_4384 hypothetical protein; TIGRFAM- YVTN beta-propeller repeat; PFAM- NHL repeat (336 aa)
 
     
  0.685
Mettu_4312
Uncharacterized protein; PFAM- FIST domain, N-terminal; FIST C domain; KEGG- vap-Vapar_6102 domain of unknown function DUF1745 (389 aa)
 
          0.674
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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