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Mettu_0121 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_0121" - ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_0121ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system (246 aa)    
Predicted Functional Partners:
Mettu_0122
Transport permease protein (267 aa)
 
  0.994
Mettu_0119
ABC transporter, substrate binding protein, PQQ-dependent alcohol dehydrogenase system (397 aa)
 
          0.980
Mettu_0120
PQQ-dependent catabolism-associated beta-propeller protein (320 aa)
 
          0.976
Mettu_3940
ABC-2 type transporter (384 aa)
 
  0.881
Mettu_1232
ABC transporter substrate-binding protein (319 aa)
 
          0.867
Mettu_3054
ABC-type transporter, periplasmic subunit family 3 (317 aa)
 
          0.865
Mettu_0275
Transport permease protein (253 aa)
  0.863
Mettu_0794
Transport permease protein (254 aa)
  0.859
Mettu_3941
ABC-2 type transporter (384 aa)
 
  0.839
Mettu_0743
ABC-2 type transporter (250 aa)
   
 
  0.790
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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