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Mettu_0126 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_0126" - KEGG: mma:MM_2294 type I restriction-modification system specificity subunit in Methylobacter tundripaludum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_0126KEGG- mma-MM_2294 type I restriction-modification system specificity subunit; TIGRFAM- Restriction endonuclease, type I, EcoRI, M subunit; PFAM- DNA methylase, adenine-specific (818 aa)    
Predicted Functional Partners:
Mettu_0127
PFAM- Restriction endonuclease, type I, S subunit, EcoBI; KEGG- dol-Dole_0249 restriction modification system DNA specificity subunit (394 aa)
 
 
  0.990
Mettu_0129
Type I restriction enzyme R Protein; Subunit R is required for both nuclease and ATPase activities, but not for modification (1032 aa)
 
   
  0.980
Mettu_1992
KEGG- shm-Shewmr7_1787 type III restriction enzyme, res subunit; PFAM- Restriction endonuclease, type I, EcoRI, R subunit/Type III, Res subunit, N-terminal; Restriction endonuclease, type I, R subunit/Type III, Res subunit; SMART- DEAD-like helicase, N-terminal (1010 aa)
 
   
  0.940
Mettu_1991
KEGG- sli-Slin_6260 restriction modification system DNA specificity domain protein (435 aa)
 
 
  0.939
Mettu_0130
PFAM- Protein of unknown function DUF45; KEGG- mma-MM_2291 zinc metalloprotease (238 aa)
 
          0.929
Mettu_0128
KEGG- hypothetical protein (242 aa)
   
        0.849
Mettu_2503
Restriction modification system protein containing a DNA specificity domain; PFAM- Restriction endonuclease, type I, S subunit, EcoBI; KEGG- vvu-VV1_2030 restriction endonuclease S subunits (615 aa)
 
 
  0.794
Mettu_2230
KEGG- pmy-Pmen_0566 appr-1-p processing domain-containing protein; PFAM- Appr-1-p processing; SMART- Appr-1-p processing (363 aa)
 
        0.704
Mettu_2229
KEGG- pen-PSEEN0280 hypothetical protein (214 aa)
 
          0.653
Mettu_0114
KEGG- mca-MCA0402 hypothetical protein; manually curated; PFAM- Protein of unknown function DUF45 (241 aa)
 
          0.605
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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