STRINGSTRING
Mettu_0128 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_0128" - Putative uncharacterized protein in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_0128Putative uncharacterized protein (242 aa)    
Predicted Functional Partners:
Mettu_0127
Restriction modification system protein containing a DNA specificity domain (394 aa)
              0.859
Mettu_0126
Type I restriction-modification system, M subunit (818 aa)
              0.859
Mettu_0498
Putative uncharacterized protein (178 aa)
   
          0.768
Mettu_4188
Transposase, putative (205 aa)
   
          0.761
Mettu_3867
Putative uncharacterized protein (178 aa)
   
          0.757
Mettu_2544
Putative uncharacterized protein (177 aa)
   
          0.757
Mettu_0401
Transposase (131 aa)
   
          0.742
Mettu_0130
Putative uncharacterized protein (238 aa)
              0.671
Mettu_0129
Type I site-specific deoxyribonuclease, HsdR family (1032 aa)
            0.671
Mettu_2402
Putative uncharacterized protein (211 aa)
   
          0.660
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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