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Mettu_0129 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_0129" - Type I restriction enzyme R Protein in Methylobacter tundripaludum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_0129Type I restriction enzyme R Protein; Subunit R is required for both nuclease and ATPase activities, but not for modification (1032 aa)    
Predicted Functional Partners:
Mettu_0126
KEGG- mma-MM_2294 type I restriction-modification system specificity subunit; TIGRFAM- Restriction endonuclease, type I, EcoRI, M subunit; PFAM- DNA methylase, adenine-specific (818 aa)
 
   
  0.980
Mettu_0130
PFAM- Protein of unknown function DUF45; KEGG- mma-MM_2291 zinc metalloprotease (238 aa)
 
     
  0.968
Mettu_0127
PFAM- Restriction endonuclease, type I, S subunit, EcoBI; KEGG- dol-Dole_0249 restriction modification system DNA specificity subunit (394 aa)
   
  0.950
Mettu_1989
PFAM- DNA methylase, adenine-specific; KEGG- nhl-Nhal_0751 N-6 DNA methylase (789 aa)
 
   
  0.941
Mettu_1991
KEGG- sli-Slin_6260 restriction modification system DNA specificity domain protein (435 aa)
 
   
  0.847
Mettu_2501
KEGG- gca-Galf_2917 site-specific DNA-methyltransferase (adenine-specific); PFAM- DNA methylase, adenine-specific (594 aa)
 
   
  0.790
Mettu_1948
Nucleotidyltransferase substrate binding protein, HI0074 family; KEGG- gbm-Gbem_3570 type I restriction-modification system DNA adenine N6-methyltransferase; TIGRFAM- Nucleotidyltransferase substrate binding protein, HI0074; PFAM- Nucleotidyltransferase substrate binding protein, HI0074; DNA methylase, adenine-specific (623 aa)
 
   
  0.771
Mettu_1593
Putative transcriptional regulator; PFAM- ATPase associated with various cellular activities, AAA-4; KEGG- glo-Glov_0638 putative transcriptional regulator (489 aa)
 
        0.763
Mettu_2230
KEGG- pmy-Pmen_0566 appr-1-p processing domain-containing protein; PFAM- Appr-1-p processing; SMART- Appr-1-p processing (363 aa)
 
          0.680
Mettu_0128
KEGG- hypothetical protein (242 aa)
            0.662
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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