• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Mettu_0145 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_0145" - SURF1-like protein in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_0145SURF1-like protein; KEGG- mca-MCA0131 hypothetical protein (240 aa)    
Predicted Functional Partners:
ftsY
Signal recognition particle receptor FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components (664 aa)
   
 
  0.977
Mettu_0146
KEGG- mca-MCA0132 hypothetical protein (198 aa)
 
   
  0.964
cyoE
Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group; Belongs to the UbiA prenyltransferase family. Protoheme IX farnesyltransferase subfamily (295 aa)
 
 
  0.888
Mettu_0142
PFAM- Cytochrome c oxidase assembly protein CtaG/Cox11; KEGG- mca-MCA0882 cytochrome c oxidase assembly protein (180 aa)
 
 
  0.882
Mettu_2903
PFAM- Cytochrome oxidase assembly; KEGG- mca-MCA1778 cytochrome oxidase assembly protein (322 aa)
 
 
  0.882
Mettu_0144
KEGG- lpa-lpa_00641 hypothetical protein (82 aa)
 
        0.856
Mettu_0148
SMART- ATPase, AAA+ type, core; TIGRFAM- Cell division ATP-binding protein FtsE; KEGG- hch-HCH_00573 cell division ATPase; PFAM- ABC transporter-like (218 aa)
              0.838
Mettu_0140
Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) (384 aa)
 
 
  0.833
Mettu_0149
Cell division protein FtsX; Part of the ABC transporter FtsEX involved in cellular division (332 aa)
              0.829
Mettu_0143
KEGG- mca-MCA0883 cytochrome c oxidase, subunit III; PFAM- Cytochrome c oxidase, subunit III (287 aa)
 
   
  0.825
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
Server load: low (8%) [HD]