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STRINGSTRING
Mettu_0159 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_0159" - PFAM: Glutaredoxin in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_0159PFAM- Glutaredoxin; KEGG- dma-DMR_27960 glutaredoxin (147 aa)    
Predicted Functional Partners:
Mettu_0158
PFAM- Uncharacterised conserved protein UCP020606; KEGG- ant-Arnit_0261 hypothetical protein (205 aa)
              0.847
ribB
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family (367 aa)
     
  0.834
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (930 aa)
   
 
  0.795
Mettu_2599
TIGRFAM- Thioredoxin reductase; KEGG- tcx-Tcr_0763 thioredoxin reductase; PFAM- FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family (318 aa)
   
  0.763
Mettu_3680
KEGG- ttu-TERTU_1636 ribonucleotide reductase, alpha subunit (254 aa)
   
  0.755
Mettu_3679
Vitamin B12-dependent ribonucleotide reductase; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen (716 aa)
   
  0.755
Mettu_0160
KEGG- nde-NIDE2604 putative lipoprotein (273 aa)
              0.697
Mettu_0157
N-carbamoylputrescine amidase; KEGG- geo-Geob_2344 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; PFAM- Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (294 aa)
   
    0.672
Mettu_3471
KEGG- rfr-Rfer_1613 selenide, water dikinase; TIGRFAM- Pyridine nucleotide-disulphide oxidoreductase family protein, N-terminal; Selenide water dikinase; PFAM- AIR synthase related protein, C-terminal; AIR synthase related protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Belongs to the selenophosphate synthase 1 family. Class I subfamily (756 aa)
         
  0.595
nadK
NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2’-hydroxyl of the adenosine moiety of NAD to yield NADP (301 aa)
         
  0.533
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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