STRINGSTRING
Mettu_0189 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_0189" - Antitoxin in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_0189Antitoxin ; Antitoxin component of a toxin-antitoxin (TA) module (96 aa)    
Predicted Functional Partners:
Mettu_2675
Addiction module toxin, RelE/StbE family (93 aa)
 
 
  0.938
Mettu_0188
Putative uncharacterized protein (220 aa)
              0.801
Mettu_4252
Putative uncharacterized protein (103 aa)
 
 
  0.779
Mettu_3010
Plasmid stabilization system (87 aa)
   
 
  0.733
Mettu_2556
Plasmid stabilization system (87 aa)
   
 
  0.733
Mettu_0397
Addiction module toxin, RelE/StbE family (86 aa)
   
 
  0.733
Mettu_0082
Addiction module toxin, RelE/StbE family (89 aa)
   
 
  0.733
Mettu_0190
HI0933 family protein (392 aa)
              0.674
Mettu_0186
Putative chaperone heat-shock protein (932 aa)
     
      0.529
Mettu_0187
Putative uncharacterized protein (117 aa)
              0.516
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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