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Mettu_0197 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_0197" - Regulatory protein TetR in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_0197Regulatory protein TetR (225 aa)    
Predicted Functional Partners:
Mettu_0196
Efflux transporter, RND family, MFP subunit (425 aa)
 
          0.703
Mettu_0195
Transporter, hydrophobe/amphiphile efflux-1 (HAE1) family (1066 aa)
              0.640
Mettu_0194
RND efflux system, outer membrane lipoprotein, NodT family (497 aa)
         
  0.625
Mettu_1458
Secretion protein HlyD family protein (391 aa)
 
     
  0.575
Mettu_3935
Secretion protein HlyD family protein (338 aa)
 
     
  0.560
Mettu_2942
Secretion protein HlyD family protein (401 aa)
 
     
  0.556
Mettu_3532
Secretion protein HlyD family protein (395 aa)
         
  0.497
Mettu_2120
Secretion protein HlyD family protein (408 aa)
         
  0.497
Mettu_1913
Putative uncharacterized protein (132 aa)
   
          0.449
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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