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Mettu_0210 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_0210" - YD repeat protein in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_0210YD repeat protein (789 aa)    
Predicted Functional Partners:
Mettu_0209
RHS repeat-associated protein (1161 aa)
          0.964
Mettu_0208
Putative uncharacterized protein (150 aa)
              0.840
Mettu_0204
RHS repeat-associated protein (651 aa)
 
          0.838
Mettu_3583
Lytic transglycosylase catalytic (366 aa)
   
          0.625
Mettu_0505
Cytochrome c class I (505 aa)
   
          0.583
Mettu_2032
Metallophosphoesterase (358 aa)
   
          0.493
Mettu_2031
Cytochrome c family protein (134 aa)
   
          0.485
Mettu_0212
Putative uncharacterized protein (151 aa)
              0.447
Mettu_0211
Putative uncharacterized protein (101 aa)
              0.447
Mettu_3119
Sulfotransferase (404 aa)
   
          0.405
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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