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Mettu_0213 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_0213" - Sel1 domain protein repeat-containing protein in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_0213Sel1 domain protein repeat-containing protein (112 aa)    
Predicted Functional Partners:
Mettu_3149
Heat shock protein DnaJ domain protein (362 aa)
   
          0.763
Mettu_3413
Heat shock protein DnaJ domain protein (222 aa)
   
          0.761
Mettu_0212
Putative uncharacterized protein (151 aa)
              0.752
Mettu_0211
Putative uncharacterized protein (101 aa)
              0.752
Mettu_1383
Sel1 domain protein repeat-containing protein (152 aa)
   
          0.741
Mettu_0209
RHS repeat-associated protein (1161 aa)
 
          0.502
Mettu_0214
TPR repeat-containing protein (279 aa)
              0.460
Mettu_0210
YD repeat protein (789 aa)
              0.401
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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