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STRINGSTRING
Mettu_0230 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_0230" - KEGG: nmu:Nmul_A1680 cytochrome c family protein in Methylobacter tundripaludum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_0230KEGG- nmu-Nmul_A1680 cytochrome c family protein (171 aa)    
Predicted Functional Partners:
carA
TIGRFAM- Carbamoyl phosphate synthase, small subunit; KEGG- mmw-Mmwyl1_4035 carbamoyl phosphate synthase small subunit; PFAM- Carbamoyl phosphate synthase, small subunit, N-terminal; Glutamine amidotransferase class-I, C-terminal; Belongs to the CarA family (376 aa)
         
    0.928
carB
TIGRFAM- Carbamoyl phosphate synthase, large subunit, glutamine-dependent; KEGG- mca-MCA1852 carbamoyl-phosphate synthase, large subunit; PFAM- Carbamoyl phosphate synthetase, large subunit, ATP-binding; Carbamoyl phosphate synthase, large subunit, N-terminal; Carbamoyl phosphate synthetase, large subunit, oligomerisation; MGS-like; Belongs to the CarB family (1072 aa)
         
    0.928
pyrC
Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate (343 aa)
         
    0.928
Mettu_1595
Dihydroorotase, multifunctional complex type; KEGG- mca-MCA2332 dihydroorotase family protein; TIGRFAM- Dihydroorotase multifunctional complex type; PFAM- Amidohydrolase 1 (424 aa)
         
    0.927
Mettu_3583
PFAM- Lytic transglycosylase-like, catalytic; KEGG- lytic transglycosylase catalytic (366 aa)
   
          0.733
Mettu_2964
PFAM- Multicopper oxidase, type 3; KEGG- mca-MCA2129 multicopper oxidase family protein (577 aa)
   
 
    0.731
Mettu_2814
PFAM- Multicopper oxidase, type 2; KEGG- nwa-Nwat_0628 multicopper oxidase type 3 (545 aa)
   
 
    0.695
Mettu_0339
KEGG- mca-MCA1689 hypothetical protein (428 aa)
   
          0.695
Mettu_1811
KEGG- mca-MCA0965 hypothetical protein (193 aa)
   
          0.667
Mettu_0425
KEGG- hypothetical protein (579 aa)
   
          0.629
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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