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Mettu_0238 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_0238" - ChaB family protein in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_0238ChaB family protein; PFAM- ChaB; KEGG- cyn-Cyan7425_0020 ChaB family protein (70 aa)    
Predicted Functional Partners:
Mettu_1064
CsbD family protein; PFAM- CsbD-like; KEGG- nmu-Nmul_A1196 CsbD-like; Belongs to the UPF0337 (CsbD) family (66 aa)
 
        0.434
Mettu_0239
KEGG- rva-Rvan_0182 hypothetical protein (42 aa)
              0.412
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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