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STRINGSTRING
EGW21481.1 protein (Methylobacter tundripaludum) - STRING interaction network
"EGW21481.1" - PFAM: Transposase, IS1 in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGW21481.1PFAM- Transposase, IS1; KEGG- nwa-Nwat_1407 IS1 transposase (143 aa)    
Predicted Functional Partners:
EGW21482.1
PFAM- Insertion element protein; KEGG- nwa-Nwat_1408 insertion element protein (93 aa)
   
  0.934
Mettu_0246
PFAM- Insertion element protein; KEGG- nwa-Nwat_1408 insertion element protein (93 aa)
   
  0.791
Mettu_0199
PFAM- Insertion element protein; KEGG- nwa-Nwat_1408 insertion element protein (93 aa)
   
  0.791
Mettu_0249
ChaB family protein; PFAM- ChaB; KEGG- cyn-Cyan7425_0020 ChaB family protein (67 aa)
 
          0.517
Mettu_0995
PFAM- PilT protein, N-terminal; KEGG- gpb-HDN1F_02150 hypothetical protein (135 aa)
   
          0.495
Mettu_1540
PFAM- TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG- gur-Gura_0778 TonB-dependent receptor (682 aa)
   
          0.463
Mettu_2736
Transposase IS200-family protein; PFAM- Transposase IS200-like; KEGG- tra-Trad_2701 transposase IS200-family protein (115 aa)
   
          0.445
Mettu_0490
HicA protein; Manually curated; KEGG- maq-Maqu_2667 HicA protein (82 aa)
   
          0.406
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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