• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Mettu_0287 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_0287" - KEGG: mba:Mbar_A0261 hypothetical protein in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_0287KEGG- mba-Mbar_A0261 hypothetical protein (754 aa)    
Predicted Functional Partners:
thyA
Thymidylate synthase; Catalyzes the reductive methylation of 2’-deoxyuridine- 5’-monophosphate (dUMP) to 2’-deoxythymidine-5’-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis (277 aa)
       
    0.732
Mettu_1576
Outer membrane adhesin like proteiin; TIGRFAM- VCBS repeat domain; PFAM- Putative Ig; KEGG- cch-Cag_1242 VCBS; SMART- Dystroglycan-type cadherin-like (6210 aa)
   
        0.720
pgi
HAMAP- Phosphoglucose isomerase (PGI); KEGG- chu-CHU_0472 glucose-6-phosphate isomerase; PFAM- Phosphoglucose isomerase (PGI); Belongs to the GPI family (545 aa)
       
    0.655
ndk
Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate (143 aa)
       
    0.627
adk
Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family (212 aa)
       
    0.626
Mettu_1040
KEGG- mca-MCA0597 homoserine dehydrogenase; PFAM- Homoserine dehydrogenase, catalytic; Aspartate/homoserine dehydrogenase, NAD-binding; Amino acid-binding ACT (436 aa)
       
    0.625
Mettu_4081
Aspartokinase; KEGG- mca-MCA0390 aspartate kinase; TIGRFAM- Aspartate kinase region; Aspartate kinase, monofunctional class; PFAM- Aspartate/glutamate/uridylate kinase; Amino acid-binding ACT; Belongs to the aspartokinase family (408 aa)
       
    0.618
Mettu_0288
PFAM- Cupin 2, conserved barrel; KEGG- har-HEAR2969 hypothetical protein (109 aa)
              0.540
Mettu_0286
annotation not available (77 aa)
              0.447
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
Server load: low (10%) [HD]