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trpS protein (Methylobacter tundripaludum) - STRING interaction network
"trpS" - Tryptophan--tRNA ligase in Methylobacter tundripaludum
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
trpSTryptophan--tRNA ligase; TIGRFAM- Tryptophanyl-tRNA synthetase, class Ib; KEGG- mca-MCA2526 tryptophanyl-tRNA synthetase; PFAM- Aminoacyl-tRNA synthetase, class Ib (337 aa)    
Predicted Functional Partners:
Mettu_0296
annotation not available (236 aa)
              0.845
metG
Methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 1 subfamily (672 aa)
   
   
  0.830
serS
Serine--tRNA ligase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) (423 aa)
   
 
  0.808
argS
Arginine--tRNA ligase; TIGRFAM- Arginyl-tRNA synthetase, class Ic; HAMAP- Arginyl-tRNA synthetase, class Ic; KEGG- mca-MCA3089 arginyl-tRNA synthetase (586 aa)
   
   
  0.779
pheT
TIGRFAM- Phenylalanyl-tRNA synthetase, class IIc, beta subunit, bacterial; HAMAP- Phenylalanyl-tRNA synthetase, class IIc, beta subunit, bacterial; KEGG- mca-MCA0698 phenylalanyl-tRNA synthetase, beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily (791 aa)
   
   
  0.774
proS
Proline--tRNA ligase; Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction- proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as ’pretransfer’ editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated ’posttransfer’ editing and involves deacy [...] (569 aa)
     
 
  0.774
leuS
Leucine--tRNA ligase; TIGRFAM- Leucyl-tRNA synthetase, class Ia, bacterial/mitochondrial; KEGG- tgr-Tgr7_2279 leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family (832 aa)
   
   
  0.769
cysS
Cysteine--tRNA ligase; TIGRFAM- Cysteinyl-tRNA synthetase, class Ia; KEGG- mca-MCA0509 cysteinyl-tRNA synthetase; PFAM- Cysteinyl-tRNA synthetase, class Ia, N-terminal; Cysteinyl-tRNA synthetase, class Ia, DALR; Belongs to the class-I aminoacyl-tRNA synthetase family (492 aa)
   
   
  0.762
lysS
Lysine--tRNA ligase; PFAM- Aminoacyl-tRNA synthetase, class II (D/K/N); Nucleic acid binding, OB-fold, tRNA/helicase-type; TIGRFAM- Lysyl-tRNA synthetase, class II; HAMAP- Lysyl-tRNA synthetase; KEGG- nhl-Nhal_2437 lysyl-tRNA synthetase; Belongs to the class-II aminoacyl-tRNA synthetase family (499 aa)
   
   
  0.761
guaA
GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP (528 aa)
   
   
  0.761
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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