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STRINGSTRING
Mettu_0301 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_0301" - KEGG: nhl:Nhal_3061 DNA/RNA non-specific endonuclease in Methylobacter tundripaludum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_0301KEGG- nhl-Nhal_3061 DNA/RNA non-specific endonuclease; PFAM- DNA/RNA non-specific endonuclease; SMART- Extracellular Endonuclease, subunit A (297 aa)    
Predicted Functional Partners:
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (930 aa)
       
 
  0.771
Mettu_0386
Uncharacterized protein; KEGG- aeh-Mlg_1716 beta-lactamase superfamily hydrolase (649 aa)
     
 
  0.641
Mettu_4324
PFAM- FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG- mca-MCA2155 sulfide-quinone reductase (426 aa)
       
 
  0.638
Mettu_3573
PFAM- FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG- noc-Noc_2006 putative oxidoreductase (417 aa)
       
 
  0.638
Mettu_0616
Ferredoxin--NAD(+) reductase; KEGG- ote-Oter_2142 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM- FAD-dependent pyridine nucleotide-disulphide oxidoreductase (401 aa)
       
 
  0.638
Mettu_0913
Adenylate/guanylate cyclase with Chase sensor; PFAM- CHASE2; Adenylyl cyclase class-3/4/guanylyl cyclase; KEGG- mgm-Mmc1_1858 adenylate/guanylate cyclase; SMART- Adenylyl cyclase class-3/4/guanylyl cyclase (744 aa)
     
      0.631
Mettu_2324
PFAM- Bacterial transcriptional activator domain; Tetratricopeptide TPR-4; KEGG- sme-SMa1591 CyaI3 adenylate/guanylate cyclase (1265 aa)
     
      0.631
Mettu_0300
PFAM- Protein of unknown function DUF1249; KEGG- mca-MCA2528 hypothetical protein (166 aa)
              0.574
Mettu_0299
PFAM- 6-pyruvoyl tetrahydropterin synthase-related; KEGG- mca-MCA2527 6-pyruvoyl tetrahydropterin synthase, putative (134 aa)
              0.574
Mettu_0822
TIGRFAM- Malonyl CoA-acyl carrier protein transacylase; KEGG- mca-MCA2002 malonyl CoA-acyl carrier protein transacylase; PFAM- Acyl transferase (318 aa)
     
      0.547
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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