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Mettu_0321 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_0321" - Uncharacterized protein in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_0321Uncharacterized protein; KEGG- neu-NE1751 putative type-4 fimbrial pilin related signal peptide protein (217 aa)    
Predicted Functional Partners:
Mettu_0320
TIGRFAM- Pilus modification type IV, PilV; Prepilin-type cleavage/methylation, N-terminal; KEGG- noc-Noc_2271 type IV fimbrial biogenesis protein PilV (152 aa)
 
   
  0.976
Mettu_0319
KEGG- nhl-Nhal_0910 type IV pilus assembly protein PilW (341 aa)
 
   
  0.971
Mettu_0318
KEGG- neu-NE1748 hypothetical protein (206 aa)
 
   
  0.956
Mettu_0317
PFAM- Neisseria PilC; KEGG- cja-CJA_3211 putative fimbrial protein (1660 aa)
 
   
  0.916
Mettu_0315
KEGG- maq-Maqu_0872 general secretion pathway protein H (143 aa)
 
   
  0.901
Mettu_1088
PFAM- Pilus assembly protein, PilO; KEGG- mca-MCA0327 type 4 fimbrial biogenesis protein PilO (205 aa)
 
     
  0.800
Mettu_1087
PFAM- Pilus assembly protein PilP; KEGG- mca-MCA0328 type 4 fimbrial biogenesis protein PilP (220 aa)
   
          0.768
Mettu_1089
PFAM- Fimbrial assembly; KEGG- alv-Alvin_3055 fimbrial assembly family protein (191 aa)
 
     
  0.765
Mettu_3781
KEGG- nwa-Nwat_3070 peptidoglycan-binding lysin domain-containing protein; PFAM- Peptidoglycan-binding lysin domain; SMART- Peptidoglycan-binding Lysin subgroup (372 aa)
   
     
  0.757
Mettu_1086
Type IV pilus secretin PilQ; KEGG- mca-MCA0329 fimbrial assembly protein PilQ; TIGRFAM- Type IV pilus secretin PilQ; PFAM- Type II/III secretion system; NolW-like; Secretin/TonB, short N-terminal (785 aa)
 
     
  0.722
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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