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Mettu_0335 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_0335" - KEGG: nhl:Nhal_0643 hypothetical protein in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_0335KEGG- nhl-Nhal_0643 hypothetical protein (364 aa)    
Predicted Functional Partners:
Mettu_0334
PFAM- TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG- psa-PST_1289 TonB-dependent receptor (665 aa)
              0.765
Mettu_0336
PFAM- Sulfatase; KEGG- alv-Alvin_1043 sulfatase (624 aa)
         
  0.527
Mettu_0333
Periplasmic/7TM domain sensor diguanylate cyclase; TIGRFAM- Diguanylate cyclase, predicted; PFAM- Diguanylate cyclase, predicted; Diverse 7TM receptor, transmembrane region; Diverse 7TM receptor, extracellular region 2; KEGG- app-CAP2UW1_3842 periplasmic/7TM domain sensor diguanylate cyclase; SMART- Diguanylate cyclase, predicted (680 aa)
              0.513
Mettu_0332
annotation not available (61 aa)
              0.513
Mettu_0331
TIGRFAM- Diguanylate cyclase, predicted; PFAM- Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; KEGG- rfr-Rfer_3572 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART- Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted (662 aa)
              0.406
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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