STRINGSTRING
Mettu_0409 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_0409" - Endonuclease/exonuclease/phosphatase in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_0409Endonuclease/exonuclease/phosphatase (502 aa)    
Predicted Functional Partners:
Mettu_0417
Disproportionating enzyme (489 aa)
       
    0.788
Mettu_0569
Trehalose synthase (1122 aa)
   
 
    0.688
Mettu_0408
Putative uncharacterized protein (554 aa)
              0.671
Mettu_0407
Putative uncharacterized protein (205 aa)
              0.671
Mettu_4023
Putative uncharacterized protein (93 aa)
   
          0.670
Mettu_0410
Putative uncharacterized protein (99 aa)
              0.651
Mettu_1961
Putative uncharacterized protein (614 aa)
   
          0.618
Mettu_3513
Polysaccharide biosynthesis protein (439 aa)
   
        0.597
Mettu_0406
Putative uncharacterized protein (51 aa)
              0.592
Mettu_3028
Dihydrolipoyl dehydrogenase (715 aa)
 
          0.587
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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