STRINGSTRING
Mettu_0412 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_0412" - Polysaccharide deacetylase in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_0412Polysaccharide deacetylase (256 aa)    
Predicted Functional Partners:
Mettu_0687
Glycosyl transferase family 2 (442 aa)
 
   
  0.982
Mettu_3299
Glycosyl transferase family 2 (559 aa)
   
 
  0.850
Mettu_0634
Glycosyl transferase family 2 (876 aa)
   
   
  0.843
Mettu_4228
Glycosyl transferase family 2 (394 aa)
   
   
  0.841
Mettu_3252
Glycosyl transferase family 2 (256 aa)
 
 
  0.793
Mettu_2134
Glycosyl transferase family 2 (274 aa)
 
 
  0.771
Mettu_2531
Glycosyl transferase family 2 (320 aa)
   
 
  0.763
Mettu_4233
Glycosyl transferase family 2 (321 aa)
 
 
  0.763
Mettu_4232
Glycosyl transferase family 2 (331 aa)
 
 
  0.763
Mettu_3903
Glycosyl transferase family 2 (345 aa)
   
 
  0.763
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
Server load: low (22%) [HD]