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STRINGSTRING
Mettu_0412 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_0412" - PFAM: Polysaccharide deacetylase in Methylobacter tundripaludum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_0412PFAM- Polysaccharide deacetylase; KEGG- cpi-Cpin_1868 polysaccharide deacetylase (256 aa)    
Predicted Functional Partners:
Mettu_0687
Poly-beta-1,6-N-acetyl-D-glucosamine synthase; PFAM- Glycosyl transferase, family 2; KEGG- pca-Pcar_2790 N-glycosyltransferase (442 aa)
 
 
  0.939
Mettu_3211
Conserved repeat domain protein; TIGRFAM- Protein of unknown function DUF11; PFAM- Protein of unknown function DUF11; KEGG- har-HEAR1945 putative mannose-sensitive agglutinin (MSHA) biogenesis protein MshQ (pilus type IV); putative signal peptide; SMART- LamG-like jellyroll fold (1696 aa)
   
 
  0.752
Mettu_0314
KEGG- sat-SYN_02082 membrane carboxypeptidase (1047 aa)
       
  0.686
Mettu_1576
Outer membrane adhesin like proteiin; TIGRFAM- VCBS repeat domain; PFAM- Putative Ig; KEGG- cch-Cag_1242 VCBS; SMART- Dystroglycan-type cadherin-like (6210 aa)
   
 
  0.665
Mettu_1792
PFAM- Glycosyl transferase, family 2; KEGG- gur-Gura_3784 glycosyl transferase family protein (326 aa)
 
 
  0.496
Mettu_3895
PFAM- Glycosyl transferase, family 2; KEGG- ade-Adeh_2775 glycosyl transferase family protein (292 aa)
 
 
  0.489
guaB
Inosine-5’-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5’-phosphate (IMP) to xanthosine 5’-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth; Belongs to the IMPDH/GMPR family (488 aa)
       
    0.472
glgA
Glycogen synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose (477 aa)
         
  0.465
Mettu_0634
PFAM- Glycosyl transferase, family 2; Glycoside hydrolase, family 17; KEGG- pla-Plav_0560 glycosyl transferase family protein (876 aa)
   
 
  0.433
Mettu_4233
PFAM- Glycosyl transferase, family 2; KEGG- mei-Msip34_1830 glycosyl transferase family 2 (321 aa)
 
 
  0.417
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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