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Mettu_0423 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_0423" - KEGG: mca:MCA0520 hypothetical protein in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_0423KEGG- mca-MCA0520 hypothetical protein (219 aa)    
Predicted Functional Partners:
Mettu_2304
Efflux transporter, RND family, MFP subunit; KEGG- nmu-Nmul_A1841 secretion protein HlyD; TIGRFAM- Secretion protein HlyD; PFAM- Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family (388 aa)
   
          0.534
cysS
Cysteine--tRNA ligase; TIGRFAM- Cysteinyl-tRNA synthetase, class Ia; KEGG- mca-MCA0509 cysteinyl-tRNA synthetase; PFAM- Cysteinyl-tRNA synthetase, class Ia, N-terminal; Cysteinyl-tRNA synthetase, class Ia, DALR; Belongs to the class-I aminoacyl-tRNA synthetase family (492 aa)
              0.475
Mettu_1913
KEGG- spl-Spea_1502 hypothetical protein (132 aa)
   
          0.412
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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