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Mettu_0454 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_0454" - KEGG: dae:Dtox_2976 CRISPR-associated protein, Cmr5 family in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_0454KEGG- dae-Dtox_2976 CRISPR-associated protein, Cmr5 family; TIGRFAM- CRISPR-associated protein, TM1791.1; PFAM- CRISPR-associated protein, TM1791.1 (129 aa)    
Predicted Functional Partners:
Mettu_0455
KEGG- ttr-Tter_1949 CRISPR-associated RAMP protein, Cmr4 family; TIGRFAM- CRISPR-associated RAMP Cmr4; PFAM- Protein of unknown function DUF324 (296 aa)
 
 
 
  0.986
Mettu_0453
KEGG- dae-Dtox_2975 CRISPR-associated RAMP protein, Cmr6 family; TIGRFAM- CRISPR-associated protein, TM1791; PFAM- Protein of unknown function DUF324 (368 aa)
 
 
 
  0.981
Mettu_0457
TIGRFAM- CRISPR-associated protein Crm2; KEGG- dae-Dtox_2979 CRISPR-associated protein, Crm2 family (634 aa)
 
 
 
  0.961
Mettu_0458
Manually curated; TIGRFAM- CRISPR-associated protein TM1795 family, N-terminal; KEGG- rxy-Rxyl_0264 CRISPR-associated RAMP Cmr1 family protein; PFAM- Protein of unknown function DUF324 (398 aa)
 
 
 
  0.951
Mettu_0456
PFAM- CRISPR-associated protein, Cmr3; KEGG- rxy-Rxyl_0262 hypothetical protein (388 aa)
 
     
  0.874
Mettu_2658
CoA-binding domain protein; PFAM- CoA-binding; GCN5-related N-acetyltransferase; KEGG- gca-Galf_1381 CoA-binding domain-containing protein (893 aa)
   
 
      0.734
Mettu_0459
KEGG- paa-Paes_1983 conserved hypothetical cytosolic protein (315 aa)
 
          0.703
Mettu_0452
annotation not available (130 aa)
              0.477
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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