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STRINGSTRING
Mettu_0478 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_0478" - PFAM: GCN5-related N-acetyltransferase in Methylobacter tundripaludum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
Coexpression
Experiments
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[Homology]
Score
Mettu_0478PFAM- GCN5-related N-acetyltransferase; KEGG- cph-Cpha266_1072 GCN5-related N-acetyltransferase (283 aa)    
Predicted Functional Partners:
Mettu_0379
ATP synthase subunit b; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family (249 aa)
     
 
    0.672
Mettu_0477
DinB family protein; PFAM- DinB; KEGG- maq-Maqu_1078 DinB family protein (171 aa)
              0.607
Mettu_1576
Outer membrane adhesin like proteiin; TIGRFAM- VCBS repeat domain; PFAM- Putative Ig; KEGG- cch-Cag_1242 VCBS; SMART- Dystroglycan-type cadherin-like (6210 aa)
 
 
      0.544
gpsA
KEGG- shn-Shewana3_0054 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; HAMAP- Glycerol-3-phosphate dehydrogenase [NAD(P)+]; PFAM- NAD-dependent glycerol-3-phosphate dehydrogenase, C-terminal; NAD-dependent glycerol-3-phosphate dehydrogenase, N-terminal (332 aa)
   
      0.532
panD
Aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine (128 aa)
   
      0.519
argA
Amino-acid acetyltransferase; KEGG- mca-MCA2084 N-acetylglutamate synthase; TIGRFAM- Amino-acid N-acetyltransferase (ArgA); PFAM- Aspartate/glutamate/uridylate kinase; GCN5-related N-acetyltransferase; Belongs to the acetyltransferase family. ArgA subfamily (438 aa)
   
 
  0.509
Mettu_3556
PFAM- Amino acid permease-associated region; KEGG- mca-MCA0344 amino acid permease family protein (469 aa)
   
      0.441
metZ
O-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O- succinyl-L-homoserine (OSHS) and hydrogen sulfide (393 aa)
   
  0.428
fumC
Fumarate hydratase class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily (467 aa)
       
      0.422
guaA
GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP (528 aa)
   
 
  0.416
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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