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Mettu_0481 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_0481" - annotation not available in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_0481annotation not available (80 aa)    
Predicted Functional Partners:
Mettu_0480
ArsC family protein; KEGG- bcm-Bcenmc03_3864 NADPH-dependent FMN reductase; TIGRFAM- Conserved hypothetical protein, ArsC related; PFAM- Arsenate reductase-like; NADPH-dependent FMN reductase; Belongs to the ArsC family (295 aa)
              0.796
Mettu_0483
PFAM- Protein of unknown function DUF820; KEGG- npu-Npun_F3673 hypothetical protein (215 aa)
              0.584
Mettu_0482
PFAM- Protein of unknown function DUF1456; KEGG- shl-Shal_3266 hypothetical protein (156 aa)
              0.584
Mettu_0486
PFAM- Peptidase M48, Ste24p; KEGG- neu-NE1475 hypothetical protein (260 aa)
              0.499
Mettu_0485
TIGRFAM- Succinyldiaminopimelate transaminase, beta/gammaproteobacteria; KEGG- mca-MCA1491 succinyldiaminopimelate transaminase; PFAM- Aminotransferase, class I/II (435 aa)
              0.499
dapD
TIGRFAM- 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase; HAMAP- 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase; KEGG- mca-MCA1490 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase; Belongs to the transferase hexapeptide repeat family (272 aa)
              0.499
dapE
Succinyl-diaminopimelate desuccinylase; Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls; Belongs to the peptidase M20A family. DapE subfamily (375 aa)
              0.449
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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