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dapD protein (Methylobacter tundripaludum) - STRING interaction network
"dapD" - Tetrahydrodipicolinate N-succinyltransferase in Methylobacter tundripaludum
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
Coexpression
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Textmining
[Homology]
Score
dapDTetrahydrodipicolinate N-succinyltransferase (272 aa)    
Predicted Functional Partners:
dapB
4-hydroxy-tetrahydrodipicolinate reductase ; Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate (267 aa)
 
 
  0.999
Mettu_0485
Succinyldiaminopimelate transaminase (435 aa)
 
 
  0.999
argD
Acetylornithine aminotransferase (395 aa)
   
 
  0.958
dapE
N-succinyl-LL-2,6-diaminoheptanedioate amidohydrolase ; Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls (375 aa)
 
   
  0.949
dapF
Diaminopimelate epimerase ; Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan (275 aa)
 
   
  0.915
Mettu_3168
4-hydroxy-tetrahydrodipicolinate synthase ; Catalyzes the condensation of (S)-aspartate-beta- semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) (291 aa)
 
   
  0.903
Mettu_1039
LL-diaminopimelate aminotransferase (394 aa)
   
 
  0.893
Mettu_1498
Aspartate transaminase (393 aa)
   
 
  0.876
Mettu_0466
Aspartate transaminase (388 aa)
   
 
  0.876
Mettu_0707
Acetylornithine transaminase (461 aa)
   
 
  0.864
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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