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Mettu_0495 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_0495" - PFAM: Protein of unknown function DUF339 in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_0495PFAM- Protein of unknown function DUF339; KEGG- aeh-Mlg_1336 hypothetical protein (79 aa)    
Predicted Functional Partners:
Mettu_0493
TIGRFAM- Succinate dehydrogenase, flavoprotein subunit; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit; KEGG- mca-MCA1550 succinate dehydrogenase flavoprotein subunit; PFAM- Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; Fumarate reductase/succinate dehydrogenase flavoprotein, C-terminal; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily (594 aa)
   
  0.984
Mettu_0494
KEGG- aeh-Mlg_1335 succinate dehydrogenase iron-sulfur subunit; TIGRFAM- Succinate dehydrogenase/fumarate reductase iron-sulphur protein (261 aa)
   
  0.953
Mettu_0492
KEGG- mca-MCA1549 succinate dehydrogenase, hydrophobic membrane anchor protein, putative; TIGRFAM- Succinate dehydrogenase, hydrophobic membrane anchor; PFAM- Succinate dehydrogenase, cytochrome b subunit (126 aa)
 
 
    0.932
Mettu_0491
KEGG- azl-AZL_001730 succinate dehydrogenase cytochrome b-556 subunit; TIGRFAM- Succinate dehydrogenase, cytochrome b556 subunit; PFAM- Succinate dehydrogenase, cytochrome b subunit (129 aa)
   
 
  0.920
Mettu_2982
Fumarate hydratase class I; Catalyzes the reversible hydration of fumarate to (S)- malate; Belongs to the class-I fumarase family (508 aa)
       
    0.859
rplP
50S ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs (137 aa)
     
        0.689
fumC
Fumarate hydratase class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily (467 aa)
   
 
  0.617
Mettu_1874
KEGG- nhl-Nhal_0443 general secretion pathway protein H; overlaps another CDS with the same product name (133 aa)
   
          0.617
Mettu_0893
Sporulation domain-containing protein; PFAM- Sporulation/cell division region, bacteria; KEGG- mca-MCA2491 hypothetical protein (320 aa)
   
        0.576
Mettu_0496
annotation not available (216 aa)
              0.464
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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