STRINGSTRING
Mettu_0505 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_0505" - Cytochrome c class I in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_0505Cytochrome c class I (505 aa)    
Predicted Functional Partners:
Mettu_4061
Cytochrome P450 (442 aa)
 
          0.782
Mettu_1102
Hemolysin-type calcium-binding region (1392 aa)
   
          0.773
Mettu_1098
Hemolysin-type calcium-binding region (1077 aa)
   
          0.766
Mettu_0507
Putative uncharacterized protein (108 aa)
 
            0.763
Mettu_4204
Multicopper oxidase type 3 (656 aa)
   
          0.740
Mettu_3583
Lytic transglycosylase catalytic (366 aa)
   
          0.738
Mettu_0597
Helix-turn-helix domain protein (110 aa)
   
          0.705
Mettu_1894
Phosphate-selective porin O and P (530 aa)
   
          0.704
Mettu_2103
Putative uncharacterized protein (458 aa)
   
          0.690
Mettu_3263
Putative uncharacterized protein (454 aa)
   
          0.686
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
Server load: low (7%) [HD]