• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Mettu_0517 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_0517" - KEGG: gsu:GSU2811 cytochrome c Hsc in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_0517KEGG- gsu-GSU2811 cytochrome c Hsc (468 aa)    
Predicted Functional Partners:
Mettu_1576
Outer membrane adhesin like proteiin; TIGRFAM- VCBS repeat domain; PFAM- Putative Ig; KEGG- cch-Cag_1242 VCBS; SMART- Dystroglycan-type cadherin-like (6210 aa)
   
  0.709
Mettu_3239
PFAM- Cytochrome d1, haem region; Cytochrome c, class I; KEGG- rme-Rmet_3331 cytochrome d1, heme region (526 aa)
   
 
  0.661
Mettu_4256
KEGG- bbt-BBta_4384 hypothetical protein; TIGRFAM- YVTN beta-propeller repeat; PFAM- NHL repeat (336 aa)
     
 
  0.612
Mettu_3243
PFAM- Cytochrome d1, haem region; KEGG- cps-CPS_4223 NirF protein (387 aa)
     
 
  0.612
Mettu_1754
KEGG- nwa-Nwat_1635 hypothetical protein (391 aa)
     
 
  0.612
Mettu_0120
TIGRFAM- PQQ-dependent catabolism-associated beta-propeller protein; YVTN beta-propeller repeat; KEGG- mca-MCA1279 hypothetical protein (320 aa)
     
 
  0.612
tolB
Protein TolB; Involved in the TonB-independent uptake of proteins (427 aa)
     
      0.599
Mettu_0518
PFAM- Protein of unknown function DUF2171; KEGG- mfa-Mfla_2659 hypothetical protein (79 aa)
              0.479
Mettu_2738
Cold-shock DNA-binding protein; KEGG- nwa-Nwat_0698 ribosomal subunit interface protein; PFAM- Cold-shock protein, DNA-binding; SMART- Cold shock protein (180 aa)
   
          0.419
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
Server load: low (6%) [HD]