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STRINGSTRING
Mettu_0522 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_0522" - PFAM: Protein of unknown function DUF2383 in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_0522PFAM- Protein of unknown function DUF2383; KEGG- hypothetical protein (147 aa)    
Predicted Functional Partners:
Mettu_0523
KEGG- scl-sce2666 hypothetical protein (171 aa)
              0.656
Mettu_0524
PFAM- Transport-associated; KEGG- pcu-pc1171 putative hyperosmotically inducible periplasmic protein (135 aa)
              0.625
Mettu_3512
PFAM- Methyltransferase type 11; KEGG- shl-Shal_1398 methyltransferase type 12 (314 aa)
     
  0.484
ubiG
Ubiquinone biosynthesis O-methyltransferase; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the methyltransferase superfamily. UbiG/COQ3 family (239 aa)
     
  0.484
hemF
Oxygen-dependent coproporphyrinogen-III oxidase; Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen-IX (304 aa)
     
   
  0.466
Mettu_0521
KEGG- nmu-Nmul_A1785 hypothetical protein (138 aa)
              0.401
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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