STRINGSTRING
Mettu_0523 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_0523" - Putative uncharacterized protein in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_0523Putative uncharacterized protein (171 aa)    
Predicted Functional Partners:
Mettu_0524
Transport-associated protein (135 aa)
              0.896
Mettu_0522
Putative uncharacterized protein (147 aa)
              0.662
Mettu_4383
Transport-associated protein (135 aa)
              0.489
Mettu_3639
Transport-associated protein (135 aa)
              0.489
Mettu_0551
Transport-associated protein (176 aa)
              0.489
Mettu_0648
Rubredoxin-type Fe(Cys)4 protein (237 aa)
   
          0.469
Mettu_0525
CsbD family protein (94 aa)
              0.434
Mettu_3962
Putative uncharacterized protein (384 aa)
   
          0.433
Mettu_3828
Heavy metal translocating P-type ATPase (648 aa)
   
          0.414
Mettu_1849
HipA domain-containing protein (306 aa)
   
          0.410
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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