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Mettu_0542 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_0542" - PRC-barrel domain protein in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_0542PRC-barrel domain protein; PFAM- PRC-barrel; KEGG- bxe-Bxe_C0556 hypothetical protein (259 aa)    
Predicted Functional Partners:
Mettu_0982
Uncharacterized protein; KEGG- hba-Hbal_0248 glucose sorbosone dehydrogenase (668 aa)
       
 
  0.651
Mettu_0543
annotation not available (88 aa)
              0.534
Mettu_0539
PFAM- Haloacid dehalogenase-like hydrolase; KEGG- bgf-BC1003_3688 haloacid dehalogenase domain-containing protein hydrolase (230 aa)
 
          0.521
Mettu_0540
HAMAP- phosphoketolase; KEGG- dba-Dbac_1358 putative phosphoketolase; PFAM- Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, N-terminal; Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase; Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, C-terminal (784 aa)
              0.419
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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