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Mettu_0550 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_0550" - KEGG: scl:sce2666 hypothetical protein in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_0550KEGG- scl-sce2666 hypothetical protein (171 aa)    
Predicted Functional Partners:
Mettu_0551
PFAM- Transport-associated; KEGG- pcu-pc1171 putative hyperosmotically inducible periplasmic protein (176 aa)
 
          0.950
Mettu_3639
PFAM- Transport-associated; KEGG- pcu-pc1171 putative hyperosmotically inducible periplasmic protein (135 aa)
 
          0.766
Mettu_0524
PFAM- Transport-associated; KEGG- pcu-pc1171 putative hyperosmotically inducible periplasmic protein (135 aa)
 
          0.765
Mettu_0982
Uncharacterized protein; KEGG- hba-Hbal_0248 glucose sorbosone dehydrogenase (668 aa)
       
 
  0.651
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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