• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Mettu_0551 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_0551" - PFAM: Transport-associated in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_0551PFAM- Transport-associated; KEGG- pcu-pc1171 putative hyperosmotically inducible periplasmic protein (176 aa)    
Predicted Functional Partners:
Mettu_0550
KEGG- scl-sce2666 hypothetical protein (171 aa)
 
          0.950
Mettu_0523
KEGG- scl-sce2666 hypothetical protein (171 aa)
 
          0.773
Mettu_4382
KEGG- scl-sce2666 hypothetical protein (171 aa)
 
          0.771
Mettu_3640
KEGG- scl-sce2666 hypothetical protein (171 aa)
 
          0.771
Mettu_3593
KEGG- scl-sce4605 hypothetical protein (290 aa)
   
          0.654
Mettu_3249
KEGG- aba-Acid345_4418 hypothetical protein (259 aa)
   
          0.577
Mettu_0648
PFAM- Rubredoxin-type Fe(Cys)4 protein; KEGG- nhl-Nhal_3986 rubredoxin-type Fe(Cys)4 protein (237 aa)
   
          0.507
Mettu_3828
TIGRFAM- ATPase, P-type, heavy metal translocating; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; KEGG- rba-RB4891 cadmium-transporting ATPase; PFAM- ATPase, P-type, ATPase-associated region; Haloacid dehalogenase-like hydrolase (648 aa)
   
          0.489
Mettu_3962
PFAM- Protein of unknown function DUF214, permase predicted; KEGG- net-Neut_0973 hypothetical protein (384 aa)
   
          0.459
Mettu_3964
PFAM- Secretion protein HlyD; KEGG- net-Neut_0975 secretion protein HlyD family protein (319 aa)
   
          0.420
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
Server load: low (9%) [HD]