• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Mettu_0555 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_0555" - PFAM: Protein of unknown function DUF326 in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_0555PFAM- Protein of unknown function DUF326; KEGG- pol-Bpro_2301 hypothetical protein (116 aa)    
Predicted Functional Partners:
Mettu_3480
Pyruvate-flavodoxin oxidoreductase; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin (1212 aa)
   
 
  0.910
Mettu_0758
KEGG- mca-MCA2039 glutamate synthase, large subunit; PFAM- Glutamine amidotransferase, class-II; Glutamate synthase, central-N; Glutamate synthase, central-C; Glutamate synthase, alpha subunit, C-terminal (1539 aa)
   
 
    0.723
Mettu_0443
Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family (803 aa)
       
  0.701
Mettu_2618
TIGRFAM- Oxaloacetate decarboxylase, alpha subunit; KEGG- pmy-Pmen_2893 oxaloacetate decarboxylase; PFAM- Conserved carboxylase region; Pyruvate carboxyltransferase; Biotin/lipoyl attachment (601 aa)
         
  0.639
Mettu_3882
KEGG- nhl-Nhal_0014 formylmethanofuran dehydrogenase subunit A; TIGRFAM- Formylmethanofuran dehydrogenase, subunit A; PFAM- Amidohydrolase 3 (555 aa)
       
  0.620
Mettu_3879
TIGRFAM- Formylmethanofuran dehydrogenase subunit C; KEGG- nhl-Nhal_0012 formylmethanofuran dehydrogenase subunit C; PFAM- Glutamate synthase, alpha subunit, C-terminal (271 aa)
       
    0.609
Mettu_2982
Fumarate hydratase class I; Catalyzes the reversible hydration of fumarate to (S)- malate; Belongs to the class-I fumarase family (508 aa)
         
  0.606
Mettu_1727
Multi-sensor hybrid histidine kinase; TIGRFAM- PAS; PFAM- ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS fold-4; PAS fold; Signal transduction response regulator, receiver region; KEGG- rfr-Rfer_3395 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART- Signal transduction response regulator, receiver region; ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAC motif; PAS; Tetratricopeptide repeat (1759 aa)
   
 
  0.561
Mettu_3793
PFAM- Oxidoreductase FAD/NAD(P)-binding; KEGG- mca-MCA0335 hypothetical protein (1230 aa)
   
 
  0.542
Mettu_2658
CoA-binding domain protein; PFAM- CoA-binding; GCN5-related N-acetyltransferase; KEGG- gca-Galf_1381 CoA-binding domain-containing protein (893 aa)
         
  0.539
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
Server load: low (11%) [HD]