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Mettu_0558 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_0558" - KEGG: tgr:Tgr7_2539 hypothetical protein in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_0558KEGG- tgr-Tgr7_2539 hypothetical protein (242 aa)    
Predicted Functional Partners:
Mettu_0557
Transcriptional activator ligand binding domain protein; PFAM- Bacterial transcription activator, effector binding; KEGG- aav-Aave_4607 transcription activator, effector binding (154 aa)
              0.507
Mettu_2685
PFAM- Protein of unknown function DUF1451; KEGG- aeh-Mlg_0399 hypothetical protein (161 aa)
   
          0.484
Mettu_0559
PFAM- Uncharacterised protein family UPF0029, Impact, N-terminal; KEGG- mmb-Mmol_1011 protein of unknown function UPF0029 (188 aa)
              0.480
Mettu_1737
KEGG- ppr-PBPRA0857 hypothetical protein (110 aa)
   
          0.468
Mettu_0556
annotation not available (110 aa)
              0.418
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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