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Mettu_0576 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_0576" - TIGRFAM: Hopene cyclase in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_0576TIGRFAM- Hopene cyclase; Squalene cyclase; KEGG- mca-MCA0812 squalene-hopene cyclase; PFAM- Prenyltransferase/squalene oxidase (654 aa)    
Predicted Functional Partners:
Mettu_0711
PFAM- Squalene/phytoene synthase; KEGG- mca-MCA0813 squalene synthase (399 aa)
 
  0.969
Mettu_0712
KEGG- nmu-Nmul_A2560 radical SAM family protein; TIGRFAM- Hopanoid biosynthesis associated radical SAM protein HpnH; PFAM- Radical SAM (369 aa)
 
     
  0.817
Mettu_0709
KEGG- mca-MCA0811 phosphorylase family protein; TIGRFAM- Hopanoid-associated phosphorylase HpnG; PFAM- Nucleoside phosphorylase (239 aa)
 
   
  0.812
Mettu_2989
TIGRFAM- Hopanoid biosynthesis associated RND transporter like protein HpnN; KEGG- nmu-Nmul_A1652 hypothetical protein (883 aa)
 
   
  0.789
Mettu_0708
TIGRFAM- Hopanoid biosynthesis associated RND transporter like protein HpnN; KEGG- mca-MCA0810 hypothetical protein (856 aa)
 
          0.779
Mettu_3830
PFAM- NUDIX hydrolase domain; KEGG- ote-Oter_2376 NUDIX hydrolase (168 aa)
     
 
  0.756
Mettu_4061
PFAM- Cytochrome P450; KEGG- xau-Xaut_0387 cytochrome P450 (442 aa)
 
  0.718
Mettu_4173
Unspecific monooxygenase; KEGG- nmu-Nmul_A2167 cytochrome P450; PFAM- Cytochrome P450 (451 aa)
 
  0.711
guaB
Inosine-5’-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5’-phosphate (IMP) to xanthosine 5’-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth; Belongs to the IMPDH/GMPR family (488 aa)
       
    0.676
Mettu_0710
TIGRFAM- Hopene cyclase; Squalene cyclase; KEGG- mca-MCA0812 squalene-hopene cyclase; PFAM- Prenyltransferase/squalene oxidase (651 aa)
   
   
 
0.631
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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