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Mettu_0590 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_0590" - CsbD family protein in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_0590CsbD family protein; PFAM- CsbD-like; KEGG- alv-Alvin_1144 CsbD family protein; Belongs to the UPF0337 (CsbD) family (61 aa)    
Predicted Functional Partners:
Mettu_0580
KEGG- bcm-Bcenmc03_1695 hypothetical protein (154 aa)
   
          0.679
Mettu_0427
PFAM- PepSY-associated TM helix; KEGG- mmb-Mmol_1912 PepSY-associated TM helix domain protein (219 aa)
   
          0.601
Mettu_0539
PFAM- Haloacid dehalogenase-like hydrolase; KEGG- bgf-BC1003_3688 haloacid dehalogenase domain-containing protein hydrolase (230 aa)
   
          0.593
Mettu_0591
CsbD family protein; PFAM- CsbD-like; KEGG- dar-Daro_2060 CsbD-like; Belongs to the UPF0337 (CsbD) family (92 aa)
 
       
0.580
Mettu_4186
KEGG- sbn-Sbal195_1984 hypothetical protein (78 aa)
   
          0.473
Mettu_3513
PFAM- Polysaccharide biosynthesis protein; KEGG- sth-STH2704 polysaccharide biosynthesis protein (439 aa)
   
          0.428
Mettu_4146
PFAM- Alpha/beta hydrolase fold-1; KEGG- mca-MCA0369 alpha/beta fold family hydrolase (267 aa)
   
          0.423
Mettu_0592
KEGG- mca-MCA1082 hypothetical protein (105 aa)
              0.419
Mettu_3971
PFAM- NUDIX hydrolase domain; KEGG- esa-ESA_01167 hypothetical protein (120 aa)
   
          0.414
Mettu_0862
KEGG- slt-Slit_0894 uncharacterized protein putative lipoprotein-like protein (333 aa)
   
          0.407
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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