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Mettu_0603 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_0603" - Transcriptional regulator, XRE family in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_0603Transcriptional regulator, XRE family (94 aa)    
Predicted Functional Partners:
Mettu_0602
Putative uncharacterized protein (105 aa)
 
        0.981
Mettu_4091
Putative uncharacterized protein (115 aa)
 
        0.876
Mettu_0604
Putative uncharacterized protein (87 aa)
              0.859
Mettu_4092
Putative uncharacterized protein (94 aa)
   
          0.662
Mettu_4320
Putative uncharacterized protein (108 aa)
 
        0.589
Mettu_1385
CcdB-like toxin protein (90 aa)
   
          0.510
Mettu_2913
Putative uncharacterized protein (97 aa)
   
          0.503
Mettu_1722
Putative uncharacterized protein (94 aa)
   
          0.489
Mettu_2067
Putative uncharacterized protein (111 aa)
   
          0.459
Mettu_3411
Putative uncharacterized protein (77 aa)
   
          0.406
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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