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Mettu_0603 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_0603" - Transcriptional regulator, XRE family in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_0603Transcriptional regulator, XRE family; KEGG- eba-ebB120 hypothetical protein; PFAM- Helix-turn-helix type 3; SMART- Helix-turn-helix type 3 (94 aa)    
Predicted Functional Partners:
Mettu_0602
PFAM- Protein of unknown function DUF891; KEGG- eba-ebA3772 hypothetical protein (105 aa)
 
   
  0.968
Mettu_0604
annotation not available (87 aa)
              0.845
Mettu_4091
PFAM- Protein of unknown function DUF891; KEGG- cja-CJA_1213 hypothetical protein (115 aa)
 
   
  0.798
Mettu_4092
KEGG- nwa-Nwat_2421 hypothetical protein (94 aa)
   
          0.677
Mettu_3628
KEGG- app-CAP2UW1_3238 PilT protein domain protein; TIGRFAM- Protein of unknown function DUF132; SMART- Nucleotide binding protein, PINc (139 aa)
   
          0.627
Mettu_2054
Putative transcription regulator with HTH domain; Manually curated; KEGG- slt-Slit_2794 transcriptional regulator, XRE family (135 aa)
   
        0.587
Mettu_2913
PFAM- Protein of unknown function DUF497; KEGG- glo-Glov_2221 protein of unknown function DUF497 (97 aa)
   
          0.567
Mettu_1722
KEGG- gur-Gura_2272 hypothetical protein; manually curated; PFAM- Protein of unknown function DUF497 (94 aa)
   
          0.535
Mettu_2318
Uncharacterized protein; KEGG- vei-Veis_4998 addiction module antitoxin; TIGRFAM- Conserved hypothetical protein CHP00053; Addiction module toxin, RelE/StbE; PFAM- Plasmid stabilisation system (90 aa)
 
          0.494
Mettu_2679
PFAM- PilT protein, N-terminal; KEGG- app-CAP2UW1_1640 PilT protein domain protein (137 aa)
   
          0.469
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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