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STRINGSTRING
Mettu_0624 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_0624" - PFAM: Protein of unknown function DUF1207 in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_0624PFAM- Protein of unknown function DUF1207; KEGG- net-Neut_1663 hypothetical protein (362 aa)    
Predicted Functional Partners:
Mettu_1576
Outer membrane adhesin like proteiin; TIGRFAM- VCBS repeat domain; PFAM- Putative Ig; KEGG- cch-Cag_1242 VCBS; SMART- Dystroglycan-type cadherin-like (6210 aa)
   
  0.941
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (930 aa)
       
  0.806
Mettu_1083
KEGG- pmy-Pmen_0549 sporulation domain-containing protein; PFAM- Sporulation/cell division region, bacteria; SMART- ATPase, AAA+ type, core (628 aa)
   
 
  0.771
Mettu_2090
KEGG- mca-MCA1084 hypothetical protein (403 aa)
   
          0.759
Mettu_0623
KEGG- dba-Dbac_1033 transport-associated; PFAM- Transport-associated; SMART- Transport-associated and nodulation region, bacteria (158 aa)
 
          0.754
Mettu_1861
KEGG- nmu-Nmul_A2658 hypothetical protein (261 aa)
   
          0.753
purL
Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate (1289 aa)
     
  0.743
Mettu_3263
PFAM- Protein of unknown function DUF1597; KEGG- nmu-Nmul_A0439 hypothetical protein (454 aa)
   
          0.726
Mettu_2103
PFAM- Protein of unknown function DUF1597; KEGG- nmu-Nmul_A0439 hypothetical protein (458 aa)
   
          0.723
Mettu_1727
Multi-sensor hybrid histidine kinase; TIGRFAM- PAS; PFAM- ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS fold-4; PAS fold; Signal transduction response regulator, receiver region; KEGG- rfr-Rfer_3395 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART- Signal transduction response regulator, receiver region; ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAC motif; PAS; Tetratricopeptide repeat (1759 aa)
       
  0.713
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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